ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0H3GQ38_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0H3GQ38_F1_nD2

A0A0H3GQ38_F1_nD2

UID: 003944992

AlphaFold

Range: 326-405
AlphaFold: AF-A0A0H3GQ38
UniProt: A0A0H3GQ38 (all domains)
Gene: rsmF

Protein: Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.178) (16S rRNA m5C1407 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RsmF)

3D Structure

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Related Domains

Browse other domains in YebU_pre-PUA_dom →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCystatin-like(243)

HH-groupPre-PUA domain(243.6)

TT-groupPre-PUA domain(243.6.1)

FFamilyYebU_pre-PUA_dom(243.6.1.6)

Pfam Families

PF21150YebU_pre-PUA_dom

Ribosomal RNA small subunit methyltransferase F, pre-PUA domain

External Links

AlphaFold DB: A0A0H3GQ38 UniProt: A0A0H3GQ38

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 326-405