ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A0H3GQU0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A0H3GQU0_F1_nD2

A0A0H3GQU0_F1_nD2

UID: 003945205

AlphaFold

Range: 66-390
AlphaFold: AF-A0A0H3GQU0
UniProt: A0A0H3GQU0 (all domains)
Gene: rlmI

Protein: Ribosomal RNA large subunit methyltransferase I (EC 2.1.1.191) (23S rRNA m5C1962 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RlmI)

3D Structure

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Related Domains

Browse other domains in Methyltrans_SAM →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltrans_SAM(2003.1.5.74)

Pfam Families

PF10672Methyltrans_SAM

S-adenosylmethionine-dependent methyltransferase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: A0A0H3GQU0 UniProt: A0A0H3GQU0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-390