ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A0H3GXZ1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A0H3GXZ1_F1_nD1

A0A0H3GXZ1_F1_nD1

UID: 003946816

AlphaFold

Range: 6-385
AlphaFold: AF-A0A0H3GXZ1
UniProt: A0A0H3GXZ1 (all domains)
Gene: KPHS_43330

Protein: Translocation protein TolB

3D Structure

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Related Domains

Browse other domains in Pectate_lyase22 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyPectate_lyase22(5.1.3.31)

Pfam Families

PF14583Pectate_lyase22

Oligogalacturonate lyase

ClanCL0186Beta_propeller

External Links

AlphaFold DB: A0A0H3GXZ1 UniProt: A0A0H3GXZ1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-385