ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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A0A0H3H3L1_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A0H3H3L1_F1_nD4

A0A0H3H3L1_F1_nD4

UID: 003947450

AlphaFold

Range: 271-405
UniProt: A0A0H3H3L1 (all domains)
Gene: KPHS_47510

Protein: RNA polymerase sigma-54 factor

3D Structure

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Related Domains

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Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamily(101.1.1.33)

Pfam Families

PF04552Sigma54_DBD

Sigma-54, DNA binding domain

ClanCL0123HTH

PF04963Sigma54_CBD

Sigma-54 factor, core binding domain

ClanCL0123HTH

External Links

UniProt: A0A0H3H3L1

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