ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O69548_F1_nD9 - ECOD Domain | ECOD

ECOD/Domains/O69548_F1_nD9

O69548_F1_nD9

UID: 003949729

AlphaFold

Range: 861-910
AlphaFold: AF-O69548
UniProt: O69548 (all domains)
Gene: topA

Protein: DNA topoisomerase 1 (EC 5.6.2.1) (DNA topoisomerase I) (Omega-protein) (Relaxing enzyme) (Swivelase) (Untwisting enzyme)

3D Structure

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Related Domains

Browse other domains in Toprim_C_rpt →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupMycobacterium tuberculosis Topoisomerase I C-terminal domain(375.13)

TT-groupMycobacterium tuberculosis Topoisomerase I C-terminal domain(375.13.1)

FFamilyToprim_C_rpt(375.13.1.1)

Pfam Families

PF13368Toprim_C_rpt

Topoisomerase C-terminal repeat

External Links

AlphaFold DB: O69548 UniProt: O69548

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 861-910