ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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O53464_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O53464_F1_nD1

O53464_F1_nD1

UID: 003951529

AlphaFold

Range: 6-100
AlphaFold: AF-O53464
UniProt: O53464 (all domains)
Gene: vapB45

Protein: Putative antitoxin VapB45

3D Structure

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Related Domains

Browse other domains in HTH_66 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupPutative DNA-binding domain(101.1.9)

FFamilyHTH_66(101.1.9.24)

Pfam Families

Putative DNA-binding HTH domain

ClanCL0123HTH

External Links

AlphaFold DB: O53464 UniProt: O53464

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-100