ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

O53638_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O53638_F1_nD1

O53638_F1_nD1

UID: 003951665

AlphaFold

Range: 36-120
AlphaFold: AF-O53638
UniProt: O53638 (all domains)
Gene: ldtA

Protein: L,D-transpeptidase 1 (LDT 1) (EC 2.3.2.-) (Ldt(Mt1))

3D Structure

Loading viewer...

Related Domains

Browse other domains in Big_10 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyBig_10(11.1.1.250)

Pfam Families

Bacterial Ig domain

ClanCL0159E-set

External Links

AlphaFold DB: O53638 UniProt: O53638

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-120