ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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O53380_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O53380_F1_nD1

O53380_F1_nD1

UID: 003951706

AlphaFold

Range: 116-225
AlphaFold: AF-O53380
UniProt: O53380 (all domains)
Gene: dacB1

Protein: D-alanyl-D-alanine carboxypeptidase DacB1 (D,D-carboxypeptidase DacB1) (DD-carboxypeptidase) (DD-peptidase) (EC 3.4.16.-)

3D Structure

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Related Domains

Browse other domains in Peptidase_S11 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyPeptidase_S11(4019.1.1.2)

Pfam Families

PF00768Peptidase_S11

D-alanyl-D-alanine carboxypeptidase

ClanCL0013Beta-lactamase

External Links

AlphaFold DB: O53380 UniProt: O53380

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 116-225