ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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I6X5T4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/I6X5T4_F1_nD1

I6X5T4_F1_nD1

UID: 003953011

AlphaFold

Range: 1-55
AlphaFold: AF-I6X5T4
UniProt: I6X5T4 (all domains)
Gene: Rv2943

Protein: Probable transposase for insertion sequence element IS1533

3D Structure

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Related Domains

Browse other domains in Sigma70_r4_2 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySigma70_r4_2(101.1.1.42)

Pfam Families

PF08281Sigma70_r4_2

Sigma-70, region 4

ClanCL0123HTH

External Links

AlphaFold DB: I6X5T4 UniProt: I6X5T4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-55