ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3n8fB1 - ECOD Domain | ECOD

ECOD/Domains/e3n8fB1

e3n8fB1

UID: 000395391

PDB

Range: B:1-595
PDB: 3N8F chain B(all domains)
UniProt: A3F9D6 (all domains)

Molecule: Lactoperoxidase

3D Structure

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Related Domains

Browse other domains in An_peroxidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupHeme-dependent peroxidases(136)

HH-groupHeme-dependent peroxidases(136.1)

TT-groupHeme-dependent peroxidases(136.1.1)

FFamilyAn_peroxidase(136.1.1.3)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
Calcium ionCA
metal
Thiocyanate ionSCN

Pfam Families

PF03098An_peroxidase

Animal haem peroxidase

ClanCL0617Peroxidase

External Links

ECOD PDB View: 3N8F RCSB PDB: 3N8F PDBe: 3N8F UniProt: A3F9D6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Nitrate)

NitrateNO3
DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.