ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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P0CW33_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P0CW33_F1_nD1

P0CW33_F1_nD1

UID: 003954818

AlphaFold

Range: 1-80
AlphaFold: AF-P0CW33
UniProt: P0CW33 (all domains)
Gene: vapB25

Protein: Antitoxin VapB25

3D Structure

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Related Domains

Browse other domains in RHH_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupRibbon-helix-helix(101.1.11)

FFamilyRHH_1(101.1.11.2)

Pfam Families

Ribbon-helix-helix protein, copG family

ClanCL0057Met_repress

External Links

AlphaFold DB: P0CW33 UniProt: P0CW33

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-80