ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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P9WJ57_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P9WJ57_F1_nD1

P9WJ57_F1_nD1

UID: 003955358

AlphaFold

Range: 1-50
AlphaFold: AF-P9WJ57
UniProt: P9WJ57 (all domains)
Gene: vapB6

Protein: Putative antitoxin VapB6

3D Structure

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Related Domains

Browse other domains in VapB_antitoxin →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupRibbon-helix-helix(101.1.11)

FFamilyVapB_antitoxin(101.1.11.15)

Pfam Families

PF09957VapB_antitoxin

Bacterial antitoxin of type II TA system, VapB

ClanCL0057Met_repress

External Links

AlphaFold DB: P9WJ57 UniProt: P9WJ57

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-50