ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P9WKH9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P9WKH9_F1_nD2

P9WKH9_F1_nD2

UID: 003955758

AlphaFold

Range: 96-270
AlphaFold: AF-P9WKH9
UniProt: P9WKH9 (all domains)
Gene: Rv0796

Protein: Putative transposase for insertion sequence element IS986/IS6110 (ORFB)

3D Structure

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Related Domains

Browse other domains in rve, rve_3 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyrve, rve_3(2484.1.1.194)

Pfam Families

Integrase core domain

ClanCL0219RNase_H

Integrase core domain

ClanCL0219RNase_H

External Links

AlphaFold DB: P9WKH9 UniProt: P9WKH9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-270