ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P9WJ53_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P9WJ53_F1_nD1

P9WJ53_F1_nD1

UID: 003955846

AlphaFold

Range: 6-70
AlphaFold: AF-P9WJ53
UniProt: P9WJ53 (all domains)
Gene: vapB12

Protein: Putative antitoxin VapB12

3D Structure

Loading viewer...

Related Domains

Browse other domains in FitA-like_RHH →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupRibbon-helix-helix(101.1.11)

FFamilyFitA-like_RHH(101.1.11.30)

Pfam Families

PF22513FitA-like_RHH

Antitoxin FitA-like, ribbon-helix-helix

ClanCL0057Met_repress

External Links

AlphaFold DB: P9WJ53 UniProt: P9WJ53

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-70