ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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X8FMB4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/X8FMB4_F1_nD2

X8FMB4_F1_nD2

UID: 003960838

AlphaFold

Range: 251-335
AlphaFold: AF-X8FMB4
UniProt: X8FMB4 (all domains)

Protein: deleted

3D Structure

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Related Domains

Browse other domains in YukD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyYukD(221.1.1.34)

Pfam Families

WXG100 protein secretion system (Wss), protein YukD

ClanCL0072Ubiquitin

External Links

AlphaFold DB: X8FMB4 UniProt: X8FMB4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 251-335