ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F725_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5F725_F1_nD3

Q5F725_F1_nD3

UID: 003963219

AlphaFold

Range: 136-180,271-330
AlphaFold: AF-Q5F725
UniProt: Q5F725 (all domains)
Gene: NGO_1364

Protein: Efflux pump membrane transporter

3D Structure

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Related Domains

Browse other domains in ACR_tran →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFerredoxin domains in multidrug efflux transporter(304.28)

TT-groupMultidrug efflux transporter AcrB pore domain(304.28.1)

FFamilyACR_tran(304.28.1.1)

Pfam Families

PF00873ACR_tran

AcrB/AcrD/AcrF family

ClanCL0322RND_permease

External Links

AlphaFold DB: Q5F725 UniProt: Q5F725

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 136-180,271-330