ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5F9J8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F9J8_F1_nD1

Q5F9J8_F1_nD1

UID: 003963223

AlphaFold

Range: 6-240
AlphaFold: AF-Q5F9J8
UniProt: Q5F9J8 (all domains)
Gene: NGO_0395

Protein: Multidrug-efflux transporter

3D Structure

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Related Domains

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Classification

AArchitecturealpha bundles(a.7)

XX-groupType II ABC exporter transmembrane domain fold(1075)

HH-groupMultidrug and toxic compound extrusion (MATE) transporter(1075.5)

TT-groupMultidrug and toxic compound extrusion (MATE) transporter(1075.5.1)

FFamilyMatE(1075.5.1.1)

Pfam Families

MatE

ClanCL0222MviN_MATE

External Links

AlphaFold DB: Q5F9J8 UniProt: Q5F9J8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-240