ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F5D6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F5D6_F1_nD1

Q5F5D6_F1_nD1

UID: 003963286

AlphaFold

Range: 6-275
AlphaFold: AF-Q5F5D6
UniProt: Q5F5D6 (all domains)
Gene: cysS

Protein: Cysteine--tRNA ligase (EC 6.1.1.16) (Cysteinyl-tRNA synthetase) (CysRS)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1e →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1e(2005.1.1.12)

Pfam Families

PF01406tRNA-synt_1e

tRNA synthetases class I (C) catalytic domain

ClanCL0039HUP

External Links

AlphaFold DB: Q5F5D6 UniProt: Q5F5D6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-275