ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F6M0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F6M0_F1_nD1

Q5F6M0_F1_nD1

UID: 003963477

AlphaFold

Range: 6-85
AlphaFold: AF-Q5F6M0
UniProt: Q5F6M0 (all domains)
Gene: ddl

Protein: D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase)

3D Structure

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Related Domains

Browse other domains in Dala_Dala_lig_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupPreATP-grasp domain(2003.1.10)

FFamilyDala_Dala_lig_N(2003.1.10.2)

Pfam Families

PF01820Dala_Dala_lig_N

D-ala D-ala ligase N-terminus

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q5F6M0 UniProt: Q5F6M0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-85