ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5F8L2_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5F8L2_F1_nD3

Q5F8L2_F1_nD3

UID: 003963612

AlphaFold

Range: 266-340
AlphaFold: AF-Q5F8L2
UniProt: Q5F8L2 (all domains)
Gene: ruvB

Protein: Holliday junction branch migration complex subunit RuvB (EC 3.6.4.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RuvB_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyRuvB_C(101.1.2.71)

Pfam Families

PF05491WHD_RuvB

RuvB C-terminal winged helix domain

ClanCL0123HTH

External Links

AlphaFold DB: Q5F8L2 UniProt: Q5F8L2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 266-340