ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5F8F7_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5F8F7_F1_nD2

Q5F8F7_F1_nD2

UID: 003963624

AlphaFold

Range: 106-260
AlphaFold: AF-Q5F8F7
UniProt: Q5F8F7 (all domains)
Gene: NGO_0819

Protein: RNA methyltransferase

3D Structure

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Related Domains

Browse other domains in SpoU_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilySpoU_methylase(2488.1.1.1)

Pfam Families

PF00588SpoU_methylase

SpoU rRNA Methylase family

ClanCL0098SPOUT

External Links

AlphaFold DB: Q5F8F7 UniProt: Q5F8F7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 106-260