ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F5E2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F5E2_F1_nD1

Q5F5E2_F1_nD1

UID: 003964182

AlphaFold

Range: 6-115
AlphaFold: AF-Q5F5E2
UniProt: Q5F5E2 (all domains)
Gene: NGO_1987

Protein: UPF0102 protein NGO_1987

3D Structure

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Related Domains

Browse other domains in UPF0102 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyUPF0102(2008.1.1.6)

Pfam Families

PF02021UPF0102

Uncharacterised protein family UPF0102

ClanCL0236PDDEXK

External Links

AlphaFold DB: Q5F5E2 UniProt: Q5F5E2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-115