ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5F6F2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F6F2_F1_nD1

Q5F6F2_F1_nD1

UID: 003964445

AlphaFold

Range: 46-185
AlphaFold: AF-Q5F6F2
UniProt: Q5F6F2 (all domains)
Gene: NGO_1607

Protein: Lipopolysaccharide-assembly, LptC-related family protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in LptC →

Classification

AArchitecturebeta meanders(a.2)

XX-groupPeriplasmic lipopolysaccharide transport protein LptA (YhbN)(3523)

HH-groupPeriplasmic lipopolysaccharide transport protein LptA (YhbN)(3523.1)

TT-groupPeriplasmic lipopolysaccharide transport protein LptA (YhbN)(3523.1.1)

FFamilyLptC(3523.1.1.3)

Pfam Families

Lipopolysaccharide-assembly, LptC-related

ClanCL0259OstA

External Links

AlphaFold DB: Q5F6F2 UniProt: Q5F6F2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 46-185