ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F5K9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F5K9_F1_nD1

Q5F5K9_F1_nD1

UID: 003964479

AlphaFold

Range: 36-205,401-420
AlphaFold: AF-Q5F5K9
UniProt: Q5F5K9 (all domains)
Gene: NGO_1915

Protein: 3-deoxy-D-manno-octulosonic acid transferase (Kdo transferase) (EC 2.4.99.12) (Lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase)

3D Structure

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Related Domains

Browse other domains in Glycos_transf_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyGlycos_transf_N(7512.1.1.14)

Pfam Families

PF04413Glycos_transf_N

3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)

ClanCL0113GT-B

External Links

AlphaFold DB: Q5F5K9 UniProt: Q5F5K9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-205,401-420