ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5F6F4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F6F4_F1_nD1

Q5F6F4_F1_nD1

UID: 003964532

AlphaFold

Range: 6-240
AlphaFold: AF-Q5F6F4
UniProt: Q5F6F4 (all domains)
Gene: NGO_1605

Protein: Lipopolysaccharide export system ATP-binding protein LptB

3D Structure

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Related Domains

Browse other domains in ABC_tran,BCA_ABC_TP_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyABC_tran,BCA_ABC_TP_C(2004.1.1.7)

Pfam Families

PF00005ABC_tran

ABC transporter

ClanCL0023P-loop_NTPase

PF12399BCA_ABC_TP_C

Branched-chain amino acid ATP-binding cassette transporter

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q5F6F4 UniProt: Q5F6F4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-240