ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q5F8B8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F8B8_F1_nD1

Q5F8B8_F1_nD1

UID: 003964545

AlphaFold

Range: 26-263
AlphaFold: AF-Q5F8B8
UniProt: Q5F8B8 (all domains)
Gene: NGO_0868

Protein: Membrane protein

3D Structure

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Related Domains

Browse other domains in OpcA →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupOMPT-like(5084.2)

TT-groupOMPT-like(5084.2.1)

FFamilyOpcA(5084.2.1.2)

Pfam Families

Outer membrane protein OpcA

ClanCL0193MBB

External Links

AlphaFold DB: Q5F8B8 UniProt: Q5F8B8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-263