ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F5E1_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5F5E1_F1_nD3

Q5F5E1_F1_nD3

UID: 003964761

AlphaFold

Range: 246-290
AlphaFold: AF-Q5F5E1
UniProt: Q5F5E1 (all domains)
Gene: rsmI

Protein: Ribosomal RNA small subunit methyltransferase I (EC 2.1.1.198) (16S rRNA 2'-O-ribose C1402 methyltransferase) (rRNA (cytidine-2'-O-)-methyltransferase RsmI)

3D Structure

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Related Domains

Browse other domains in RsmI_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyRsmI_C(101.1.1.217)

Pfam Families

RsmI C-terminal HTH domain

ClanCL0123HTH

External Links

AlphaFold DB: Q5F5E1 UniProt: Q5F5E1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 246-290