ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F5W9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5F5W9_F1_nD2

Q5F5W9_F1_nD2

UID: 003964842

AlphaFold

Range: 1-115,316-440
AlphaFold: AF-Q5F5W9
UniProt: Q5F5W9 (all domains)
Gene: NGO_1800

Protein: Zinc metalloprotease (EC 3.4.24.-)

3D Structure

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Related Domains

Browse other domains in Peptidase_M50 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupFtsH protease domain-like(4070)

HH-groupFtsH protease domain-like(4070.1)

TT-groupFtsH protease domain-like(4070.1.1)

FFamilyPeptidase_M50(4070.1.1.2)

Pfam Families

PF02163Peptidase_M50

Peptidase family M50

ClanCL0126Peptidase_MA

External Links

AlphaFold DB: Q5F5W9 UniProt: Q5F5W9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-115,316-440