ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F7B7_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F7B7_F1_nD1

Q5F7B7_F1_nD1

UID: 003964861

AlphaFold

Range: 1-245
AlphaFold: AF-Q5F7B7
UniProt: Q5F7B7 (all domains)
Gene: rsmJ

Protein: Ribosomal RNA small subunit methyltransferase J (EC 2.1.1.242) (16S rRNA m2G1516 methyltransferase) (rRNA (guanine-N(2)-)-methyltransferase)

3D Structure

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Related Domains

Browse other domains in SAM_MT →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilySAM_MT(2003.1.5.38)

Pfam Families

Putative SAM-dependent methyltransferase

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q5F7B7 UniProt: Q5F7B7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-245