ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5F5L9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5F5L9_F1_nD2

Q5F5L9_F1_nD2

UID: 003964897

AlphaFold

Range: 96-138
AlphaFold: AF-Q5F5L9
UniProt: Q5F5L9 (all domains)
Gene: dksA

Protein: RNA polymerase-binding transcription factor DksA

3D Structure

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Related Domains

Browse other domains in zf-dskA_traR →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupLIM domain-like(377.1)

TT-groupLIM domain-like(377.1.1)

FFamilyzf-dskA_traR(377.1.1.7)

Pfam Families

PF01258zf-dskA_traR

Prokaryotic dksA/traR C4-type zinc finger

ClanCL0839Tbcl_zf

External Links

AlphaFold DB: Q5F5L9 UniProt: Q5F5L9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-138