ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5F7H0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F7H0_F1_nD1

Q5F7H0_F1_nD1

UID: 003964992

AlphaFold

Range: 1-189
AlphaFold: AF-Q5F7H0
UniProt: Q5F7H0 (all domains)
Gene: NGO_1208

Protein: Restriction endonuclease

3D Structure

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Related Domains

Browse other domains in RE_Eco29kI →

Classification

AArchitecturea+b three layers(a.12)

XX-groupGIY-YIG endonuclease(821)

HH-groupGIY-YIG endonuclease(821.1)

TT-groupGIY-YIG endonuclease(821.1.1)

FFamilyRE_Eco29kI(821.1.1.2)

Pfam Families

PF09517RE_Eco29kI

Eco29kI GIY-YIG domain

ClanCL0418GIY-YIG

External Links

AlphaFold DB: Q5F7H0 UniProt: Q5F7H0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-189