ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F9I3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F9I3_F1_nD1

Q5F9I3_F1_nD1

UID: 003965051

AlphaFold

Range: 6-35,56-225
AlphaFold: AF-Q5F9I3
UniProt: Q5F9I3 (all domains)
Gene: pmbA

Protein: Peptidase PmbA

3D Structure

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Related Domains

Browse other domains in PmbA_TldD_1st, PmbA_TldD_2nd →

Classification

AArchitecturea+b two layers(a.11)

XX-groupa+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)(512)

HH-groupa+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)(512.1)

TT-groupa+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523)(512.1.1)

FFamilyPmbA_TldD_1st, PmbA_TldD_2nd(512.1.1.3)

Pfam Families

PF01523PmbA_TldD_1st

PmbA/TldA metallopeptidase domain 1

PF19290PmbA_TldD_2nd

PmbA/TldA metallopeptidase central domain

External Links

AlphaFold DB: Q5F9I3 UniProt: Q5F9I3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-35,56-225