ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5F5Q4_F1_nD7 - ECOD Domain | ECOD

ECOD/Domains/Q5F5Q4_F1_nD7

Q5F5Q4_F1_nD7

UID: 003965103

AlphaFold

Range: 681-720
AlphaFold: AF-Q5F5Q4
UniProt: Q5F5Q4 (all domains)
Gene: topA

Protein: DNA topoisomerase 1 (EC 5.6.2.1) (DNA topoisomerase I)

3D Structure

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Related Domains

Browse other domains in zf-C4_Topoisom →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyzf-C4_Topoisom(375.1.1.9)

Pfam Families

PF01396Zn_ribbon_Top1

Topoisomerase DNA binding C4 zinc finger

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: Q5F5Q4 UniProt: Q5F5Q4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 681-720