ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F534_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F534_F1_nD1

Q5F534_F1_nD1

UID: 003965237

AlphaFold

Range: 6-165
AlphaFold: AF-Q5F534
UniProt: Q5F534 (all domains)
Gene: luxS

Protein: S-ribosylhomocysteine lyase (EC 4.4.1.21) (AI-2 synthesis protein) (Autoinducer-2 production protein LuxS)

3D Structure

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Related Domains

Browse other domains in LuxS →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyLuxS(309.1.1.3)

Pfam Families

S-Ribosylhomocysteinase (LuxS)

ClanCL0094Peptidase_ME

External Links

AlphaFold DB: Q5F534 UniProt: Q5F534

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-165