ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5F8G8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F8G8_F1_nD1

Q5F8G8_F1_nD1

UID: 003965310

AlphaFold

Range: 1-218
AlphaFold: AF-Q5F8G8
UniProt: Q5F8G8 (all domains)
Gene: NGO_0805

Protein: Nickel-dependent hydrogenase b-type cytochrome subunit

3D Structure

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Related Domains

Browse other domains in Ni_hydr_CYTB →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupTransmembrane di-heme cytochromes(5069.1.1)

FFamilyNi_hydr_CYTB(5069.1.1.2)

Pfam Families

PF01292Ni_hydr_CYTB

Prokaryotic cytochrome b561

ClanCL03282heme_cytochrom

External Links

AlphaFold DB: Q5F8G8 UniProt: Q5F8G8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-218