ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F6L6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F6L6_F1_nD1

Q5F6L6_F1_nD1

UID: 003965314

AlphaFold

Range: 1-95
AlphaFold: AF-Q5F6L6
UniProt: Q5F6L6 (all domains)
Gene: murD

Protein: UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) (D-glutamic acid-adding enzyme) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)

3D Structure

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Related Domains

Browse other domains in MurD-like_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupMurCD/PglD N-terminal domain-like(2003.1.8)

FFamilyMurD-like_N(2003.1.8.4)

Pfam Families

PF21799MurD-like_N

Mur ligase MurD-like, N-terminal domain

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q5F6L6 UniProt: Q5F6L6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-95