ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5F7M4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5F7M4_F1_nD2

Q5F7M4_F1_nD2

UID: 003965505

AlphaFold

Range: 186-300
AlphaFold: AF-Q5F7M4
UniProt: Q5F7M4 (all domains)
Gene: NGO_1146

Protein: Replication initiation factor family protein

3D Structure

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Related Domains

Browse other domains in Rep_trans →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupTATA-box binding protein-like(331.1)

TT-groupTATA-box binding protein-like(331.1.1)

FFamilyRep_trans(331.1.1.2)

Pfam Families

PF02486Rep_trans

Replication initiation factor

ClanCL0407TBP-like

External Links

AlphaFold DB: Q5F7M4 UniProt: Q5F7M4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 186-300