ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5F8X0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5F8X0_F1_nD2

Q5F8X0_F1_nD2

UID: 003965586

RepresentativeAlphaFold

Range: 286-560
AlphaFold: AF-Q5F8X0
UniProt: Q5F8X0 (all domains)
Gene: NGO_0640

Protein: Type III restriction-modification system HindVIP enzyme res

3D Structure

Loading viewer...

Related Domains

Browse other domains in HI_1054_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyHI_1054_N(2004.1.1.410)

Pfam Families

PF27159HI_1054_N

HI_1054 N-terminal region

External Links

AlphaFold DB: Q5F8X0 UniProt: Q5F8X0

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 286-560