ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F5E1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F5E1_F1_nD1

Q5F5E1_F1_nD1

UID: 003965607

AlphaFold

Range: 11-125
AlphaFold: AF-Q5F5E1
UniProt: Q5F5E1 (all domains)
Gene: rsmI

Protein: Ribosomal RNA small subunit methyltransferase I (EC 2.1.1.198) (16S rRNA 2'-O-ribose C1402 methyltransferase) (rRNA (cytidine-2'-O-)-methyltransferase RsmI)

3D Structure

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Related Domains

Browse other domains in TP_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupTetrapyrrole methylase N-terminal domain(7550)

HH-groupTetrapyrrole methylase N-terminal domain(7550.1)

TT-groupTetrapyrrole methylase N-terminal domain(7550.1.1)

FFamilyTP_methylase(7550.1.1.1)

Pfam Families

PF00590TP_methylase

Tetrapyrrole (Corrin/Porphyrin) Methylases

External Links

AlphaFold DB: Q5F5E1 UniProt: Q5F5E1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-125