ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5F880_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5F880_F1_nD2

Q5F880_F1_nD2

UID: 003965623

AlphaFold

Range: 31-80
AlphaFold: AF-Q5F880
UniProt: Q5F880 (all domains)
Gene: NGO_0881

Protein: Integrase

3D Structure

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Related Domains

Browse other domains in HTH_21 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyHTH_21(101.1.2.244)

Pfam Families

HTH-like domain

ClanCL0123HTH

External Links

AlphaFold DB: Q5F880 UniProt: Q5F880

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-80