ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F9H9_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5F9H9_F1_nD2

Q5F9H9_F1_nD2

UID: 003965663

AlphaFold

Range: 176-435
AlphaFold: AF-Q5F9H9
UniProt: Q5F9H9 (all domains)
Gene: pcnB

Protein: Poly(A) polymerase I (PAP I) (EC 2.7.7.19)

3D Structure

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Related Domains

Browse other domains in PolyA_pol_arg_C,PolyA_pol_RNAbd →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPDEase-like(131)

HH-groupPoly A polymerase C-terminal region-like(131.2)

TT-groupPoly A polymerase C-terminal region-like(131.2.1)

FFamilyPolyA_pol_arg_C,PolyA_pol_RNAbd(131.2.1.2)

Pfam Families

PF12626PolyA_pol_arg_C

Polymerase A arginine-rich C-terminus

PF12627PolyA_pol_RNAbd

Probable RNA and SrmB- binding site of polymerase A

External Links

AlphaFold DB: Q5F9H9 UniProt: Q5F9H9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 176-435