ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5F7C8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5F7C8_F1_nD2

Q5F7C8_F1_nD2

UID: 003965747

AlphaFold

Range: 171-225
AlphaFold: AF-Q5F7C8
UniProt: Q5F7C8 (all domains)
Gene: NGO_1250

Protein: AraC family transcriptional regulator

3D Structure

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Related Domains

Browse other domains in HTH_AraC →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyHTH_AraC(101.1.1.2)

Pfam Families

PF00165HTH_AraC

Bacterial regulatory helix-turn-helix proteins, AraC family

ClanCL0123HTH

External Links

AlphaFold DB: Q5F7C8 UniProt: Q5F7C8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 171-225