ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q5F5M6_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q5F5M6_F1_nD5

Q5F5M6_F1_nD5

UID: 003965793

AlphaFold

Range: 461-545
AlphaFold: AF-Q5F5M6
UniProt: Q5F5M6 (all domains)
Gene: NGO_1895

Protein: Transcription accessory protein

3D Structure

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Related Domains

Browse other domains in HHH_3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamilyHHH_3(102.1.1.25)

Pfam Families

Helix-hairpin-helix motif

ClanCL0198HHH

External Links

AlphaFold DB: Q5F5M6 UniProt: Q5F5M6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 461-545