ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F9M9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F9M9_F1_nD1

Q5F9M9_F1_nD1

UID: 003965871

AlphaFold

Range: 1-175
AlphaFold: AF-Q5F9M9
UniProt: Q5F9M9 (all domains)
Gene: NGO_0364

Protein: Restriction endonuclease NgoFVII

3D Structure

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Related Domains

Browse other domains in RE_NgoFVII →

Classification

AArchitecturea+b three layers(a.12)

XX-groupPhospholipase D/nuclease(300)

HH-groupPhospholipase D/nuclease(300.1)

TT-groupPhospholipase D/nuclease(300.1.1)

FFamilyRE_NgoFVII(300.1.1.5)

Pfam Families

PF09565RE_NgoFVII

NgoFVII restriction endonuclease N-terminal PLD domain

ClanCL0479PLD

External Links

AlphaFold DB: Q5F9M9 UniProt: Q5F9M9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-175