ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F9M3_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q5F9M3_F1_nD3

Q5F9M3_F1_nD3

UID: 003965872

AlphaFold

Range: 916-1200
AlphaFold: AF-Q5F9M3
UniProt: Q5F9M3 (all domains)
Gene: recB

Protein: RecBCD enzyme subunit RecB (EC 3.1.11.5) (EC 5.6.2.4) (DNA 3'-5' helicase subunit RecB) (Exonuclease V subunit RecB) (ExoV subunit RecB) (Helicase/nuclease RecBCD subunit RecB)

3D Structure

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Related Domains

Browse other domains in PDDEXK_1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyPDDEXK_1(2008.1.1.59)

Pfam Families

PF12705PDDEXK_1

PD-(D/E)XK nuclease superfamily

ClanCL0236PDDEXK

External Links

AlphaFold DB: Q5F9M3 UniProt: Q5F9M3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 916-1200