ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9I6S0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9I6S0_F1_nD2

Q9I6S0_F1_nD2

UID: 003966718

AlphaFold

Range: 86-165,271-300
AlphaFold: AF-Q9I6S0
UniProt: Q9I6S0 (all domains)
Gene: PA0218

Protein: Probable transcriptional regulator

3D Structure

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Related Domains

Browse other domains in LysR_substrate →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLysR_substrate(7523.1.1.15)

Pfam Families

PF03466LysR_substrate

LysR substrate binding domain

ClanCL0177PBP

External Links

AlphaFold DB: Q9I6S0 UniProt: Q9I6S0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-165,271-300