ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9I1B4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9I1B4_F1_nD1

Q9I1B4_F1_nD1

UID: 003972539

AlphaFold

Range: 26-130
AlphaFold: AF-Q9I1B4
UniProt: Q9I1B4 (all domains)
Gene: PA2365

Protein: Type VI secretion system contractile sheath small subunit

3D Structure

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Related Domains

Browse other domains in T6SS_VipA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupSubtilisin-like(2499)

HH-groupDomain III of tail sheath protein Gp18(2499.2)

TT-groupDomain III of tail sheath protein Gp18(2499.2.1)

FFamilyT6SS_VipA(2499.2.1.3)

Pfam Families

PF05591T6SS_VipA

Type VI secretion system, VipA, VC_A0107 or Hcp2

External Links

AlphaFold DB: Q9I1B4 UniProt: Q9I1B4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-130