ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8ZPA3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8ZPA3_F1_nD1

Q8ZPA3_F1_nD1

UID: 003974884

AlphaFold

Range: 21-253
AlphaFold: AF-Q8ZPA3
UniProt: Q8ZPA3 (all domains)
Gene: dalS

Protein: ABC transporter D-alanine-binding periplasmic protein (D-alanine transporter in Salmonella)

3D Structure

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Related Domains

Browse other domains in SBP_bac_3, Lig_chan-Glu_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilySBP_bac_3, Lig_chan-Glu_bd(7523.1.1.52)

Pfam Families

PF00497SBP_bac_3

Bacterial extracellular solute-binding proteins, family 3

ClanCL0177PBP

PF10613Lig_chan-Glu_bd

Ligated ion channel L-glutamate- and glycine-binding site

ClanCL0177PBP

External Links

AlphaFold DB: Q8ZPA3 UniProt: Q8ZPA3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-253