ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q8ZQB5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8ZQB5_F1_nD2

Q8ZQB5_F1_nD2

UID: 003974933

AlphaFold

Range: 216-265,316-365
AlphaFold: AF-Q8ZQB5
UniProt: Q8ZQB5 (all domains)
Gene: ycbB

Protein: Periplasmic protein

3D Structure

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Related Domains

Browse other domains in PG_binding_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupPGBD-like(144)

HH-groupPGBD-like(144.1)

TT-groupPGBD-like(144.1.1)

FFamilyPG_binding_1(144.1.1.1)

Pfam Families

PF01471PG_binding_1

Putative peptidoglycan binding domain

ClanCL0244PGBD

External Links

AlphaFold DB: Q8ZQB5 UniProt: Q8ZQB5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 216-265,316-365