ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8ZRN3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8ZRN3_F1_nD1

Q8ZRN3_F1_nD1

UID: 003974996

AlphaFold

Range: 1-140
AlphaFold: AF-Q8ZRN3
UniProt: Q8ZRN3 (all domains)
Gene: yaeJ

Protein: Peptidyl-tRNA hydrolase ArfB (EC 3.1.1.29) (Alternative ribosome-rescue factor B)

3D Structure

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Related Domains

Browse other domains in RF-1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupPeptidyl-tRNA hydrolase domain-like(330.3)

TT-groupPeptidyl-tRNA hydrolase domain-like(330.3.1)

FFamilyRF-1(330.3.1.1)

Pfam Families

RF-1 domain

ClanCL0337RF

External Links

AlphaFold DB: Q8ZRN3 UniProt: Q8ZRN3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-140